Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLQEIKDFVKELRGLSQEELAKKENELKKELFDLRFQAAAGQLEKTARLDEVKKQIARVKTVQSEMK
2D3O Chain:W ((5-60))
-----------EMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELA
General information:
TITO was launched using:
RESULT:
Template:
2D3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1074 for 293 contacts (-3.7/contact) +
2D Compatibility (PS) -6161 + (NN) -3714 + (LL) 1252
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -16097.0 ( -54.94 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2D3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D3O-query.scw
PDB file :
Tito_Scwrl_2D3O.pdb
: