Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDA-NSRQSVTYTKEEFIQKIVP--DAQDLGKSYG-IRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKKDSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
| 1N8W Chain:A ((117-220)) | --------------------LVVPVLNARFALNAANARWGSLY-DALYGTDVIPETDGAEKGPTYNKVRGDKVIAYARKFLDDSVPLSSGSFGDATGFTVQDGQLVVALPDKSTGLANPGQFAGYTGAAESPTSVLLINHGLHIEILIDPESQVGTTDRAGVKDVILESAITTIMDFEDSVAAVDAADKVLGYRN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1N8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4067 for 544 contacts (7.5/contact) +
2D Compatibility (PS) -10322 + (NN) 2290 + (LL) 2536
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -7129.0 ( -13.10 by residue)
QMean score : 0.138
|
|
|