Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITIVSNKSRSNMRAQ-----------IDIPLFVHTNLDQISDIVTKINEEYVSKHPAIVGEPTVFGPTTNANGQFVYRINIFTQ-NGAQFDIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
| 4HW9 Chain:A ((75-259)) | --------------------------------------------------------------------------------------LSTLGVQTTSIITVLGTVGIAVALALKDYLSSIAGGIILIILHPFKKGDIIEISGLEGKVEALNFFNTSLRLHDGRLAVLPNRSVANSNIINSNNTACRRIEWVCGVGYGSDIEL-VHKTIKDVIDTMEKIDKNM----------PTFIGITDFGSSSLNFTIRVWAKIEDGIFNVRSELIERIKNALDANHIEIPFNKLDIAIKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58285 for 1029 contacts (-56.6/contact) +
2D Compatibility (PS) -18486 + (NN) -6403 + (LL) 10572
1D Compatibility (HY) -14800 + (ID) 2300
Total energy: -89702.0 ( -87.17 by residue)
QMean score : 0.261
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