Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFGKKLGFLALLMSIVLILGACGKTGLGNSTGNSTKNVTKKSAKNLKLGVSISTTNNPYFVAMKDGIDKYASNKKISIKVADAQDDAARQADDVQNFISQNVDAILINPVDSKAIVTAIKSANNANIPVILMDRGSEGGKVLTTVASDNVAAGKMAADYAVKKLGKKAKAFELSGVPGASATVDRGKGF-HSVAKSKLDILSSQSANFDRAKALNTTQNMIQGHKDVQIIFAQNDEMALGAAQAVKSAGLQNVLIVGIDGQPDAHDAIKKGDISATIAQQPAKMGEIAIQAAIDHYKGKKVEKETISPIYLVTKDNVEKYNW |
| 4ZJP Chain:A ((23-292)) | -------------------------------------------MQE-TIALTVSTLDNPFFVSLKDGAQKKATELGYKLVVLDSQNDPSKELSNVEDLTVRGAKVLLINPTDSAAVSNAVAIANRNKIPVITLDRGAAKGEVVSHIASDNVAGGKMAGDFIAQKLGDGAKVIQLEGLAGTSAARERGEGFKQAIEAHKFDVLASQPADFDRTKGLNVTENLLASKGSVQAIFAQNDEMALGALRAISAAG-KKVLVVGFDGTEDGVKAVKSGKLAATVAQQPELIGSLGVETADKILKGEKVDAKIPVALKVVTE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 69008 for 2459 contacts (28.1/contact) +
2D Compatibility (PS) -28215 + (NN) -2683 + (LL) 3012
1D Compatibility (HY) 12800 + (ID) 1250
Total energy: 52672.0 ( 21.42 by residue)
QMean score : 0.140
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