Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDSKPYT--VYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNN-HYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
| 4Q20 Chain:A ((25-254)) | -------------------------------------------------------------------------------------------------------------------------ALADRSAALAEAERLKRDFVGNVSYELRTPLTTIIGYSELLERAD--SERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQERALKDAQLGGVTLAVECEEDVGLIRGDGKRLAQTLDHLVENALRQTPP--GGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRDRG----GPGLGLALVKALVELHGGWVALESEPGNGSTFTCHLPET |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95592 for 1651 contacts (-57.9/contact) +
2D Compatibility (PS) -24379 + (NN) -12815 + (LL) 12012
1D Compatibility (HY) -9600 + (ID) 3050
Total energy: -133424.0 ( -80.81 by residue)
QMean score : 0.500
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