Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGG---YKLCKQLIETLVESMGITVPVAIHLDHGH-YDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIED---AKAMVE-TGIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
| 1GVF Chain:A ((2-283)) | -SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAY------STTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG-----------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLY-SKTPKIDFQRLAEIREVV-DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAE---------NPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131818 for 2260 contacts (-58.3/contact) +
2D Compatibility (PS) -29640 + (NN) -18904 + (LL) 1536
1D Compatibility (HY) -21600 + (ID) 5450
Total energy: -205876.0 ( -91.10 by residue)
QMean score : 0.595
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