Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVKINTRDGQIELSDDVIATVVGGSATEIFGV-VGMASKSAIKDNF-QALLRKENYAKGVVVRSSEAGIAVDVYTVMSYGVKISEVSKNIQERVKFNLENQLGLSADMVNVYVQSIKVVGED
2QR6 Chain:A ((264-320))
--------DGSIENSGDVVKAIACGADAVVLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLKSFQKVSLHVN--------
General information:
TITO was launched using:
RESULT:
Template:
2QR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6180 for 265 contacts (-23.3/contact) +
2D Compatibility (PS) -5671 + (NN) 1532 + (LL) 1304
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -11915.0 ( -44.96 by residue)
QMean score : 0.081
(partial model without unconserved sides chains):
PDB file :
Tito_2QR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QR6-query.scw
PDB file :
Tito_Scwrl_2QR6.pdb
: