Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIIELLKALFLGVVEGVT-EWLPVSSTGHLILVQEFMKLNQSKSFVEMFNIVIQLGAIMAVIVIYFKRLNPFQPGKSAREIRLTWQLWLKVVIACIPSILIALPFDNWFEAHFNFMIPIAIALIFYGFVFIWVEKRNAHLKPQVTELASMSYKTAFLIGCFQVLSIVPGTSRSGATILGAIIIGTSRSVAADFTFFLAIPTMFGYSGLKAVKYFLDGNVLSLDQSLILLVASLTAFVVSLYVIRFLTDYVKRHDFTIFGKYRIVLGSLLILYWLVVHLF |
| 4BJA Chain:A ((107-163)) | -----------LGTSENLTGAWQLVRKTGRSHVRQGFLEQNQNQMEKNYFEIVIN---------VFIERLIPFLTGEQELNYTTSQITDVWKKFLNTVISQMTDSFELERAKQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5916 for 245 contacts (-24.1/contact) +
2D Compatibility (PS) -5405 + (NN) 2247 + (LL) 18292
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 4968.0 ( 20.28 by residue)
QMean score : -0.062
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