Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEINEKVEPQPIDLGEYKFGFHDDVKPIYSTGKGLNEAVIRELSAAKGEPEWMLDFRLKSLETFNKMPMQTWGADLSDIDFDDIIYYQKASDKPARDWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEYDKLGIVFTDTDSALKEYPELFKKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNE--NTGQFERTLIIVDEGASVHYVEG-CTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYNLVTKRATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG |
4Z9N Chain:A ((120-230)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKI-----EEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEII---SKEPFGLTVRQGDARWADVVRWTHNALLNAEEYGITQANVEEMKKSDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23466 for 643 contacts (-36.5/contact) +
2D Compatibility (PS) -10983 + (NN) 4105 + (LL) 14876
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -20718.0 ( -32.22 by residue)
QMean score : 0.013
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