Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIITSILLLSCIFFMPTISAESFNASAKYALAVDLDSGKILYEKDANRPAAIASLTKIMTVYMVYKEIDNGNLKWNTKVNISDYPYQLTRES-DASNVPLEK--RRYTVKQLVDAAMISSANSAAIALAEHISGTESKFVDKMTAQLEKWGIHDSHLVNASGLNNSMLGNHIYPKSSQNDENKMSARDIAIVAYHLVNEYPSILKITSKSVAKFDKDIMHSYNYMLPDMPVFRPGITGLKTGTTELAGQSFIATSTESGMRLLTVIMHADKADKDKYARFTATNSLLNYITNTYEPNLVLAKGATYKGKEASVRDGKEQSVIAVAKNDLKV--AQKKNITKQNQLKINFKKELTAPITKKENLGKAYYVDLNKVGKGYLIKEPSVHLVAKDSIERSFFLKVWWNHFVRYVNEKL |
| 3ITB Chain:A ((5-326)) | ------------------TVEAPSVDARA--WILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLD--------APGQFS------TARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNL---NVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGA-KTDR---IRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLT---EPQLTAPLKKGQVVGTIDFQLNIEQRPLIVMENVEEGG--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112363 for 2672 contacts (-42.1/contact) +
2D Compatibility (PS) -33118 + (NN) -3785 + (LL) 4772
1D Compatibility (HY) -20000 + (ID) 4650
Total energy: -169144.0 ( -63.30 by residue)
QMean score : 0.447
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