Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLNNDNDVFKAADII------KNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDVPYCLGGGCSLVLGKGEIVKPL-PTLRPCWIVLVKPDFGISTKSIFRDIDC-KSISRVDIDLLKSAILSSDYQLMVKSMGNSLEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNS----MKGFCKEVYKVRLLR |
| 2WW4 Chain:A ((1-268)) | MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISI-ELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEK--WYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREV-------DAVLSWLLEYAPSR------LTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLSPLH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134268 for 2124 contacts (-63.2/contact) +
2D Compatibility (PS) -27693 + (NN) -7923 + (LL) 900
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -189484.0 ( -89.21 by residue)
QMean score : 0.377
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