Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIDKKEFLALIASIILLIFASVTFFLFKDHGTTQMDTVESSVNHVSDSQLTEAQDMLDKFEKKPSEKLLKDVELALNKLSNSSKKEALQKRFKKAKDKYLKDEADKKATKDATDLVEILEQAPSEENVLKAEAAVNKLTVKE--SKEALQKRIDTVKTQYGLIGNQTPSSSVAETTEQGTANPASQDTSSYVNQNVAPTYEQPQTNNTPVTPGVNNTVPTPGTGTAPATNGTGVAQ |
2NOJ Chain:B ((55-104)) | -------------------------------------------------------------------------------------------------------------VVDAQKAVELFKRTRTVATHRKAQRAVNLIHFQHSYEKKKLQRQIDLVLK------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2200 for 294 contacts (-7.5/contact) +
2D Compatibility (PS) -5324 + (NN) -4352 + (LL) 10288
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -4738.0 ( -16.12 by residue)
QMean score : 0.650
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