Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKEAVDGQVRALNAA-GVEITDFNKGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK |
4Q16 Chain:A ((11-280)) | --LRSHIIRELHVQPDIDPGAEVERRVAFLCDYL-QSTPTKGFVLGISGGQDSTLAGRLCQLAVERRRSQ-GHGATFLAVRLPYGVQADEADAQQALDFIQADREVTVNIKEAADASVAAAQAALGSEVRDFVRGNVKARERMVAQYALAGQENLLVVGTDHAAEALTGFYTKYGDGGVDLTPLSGLTKRQGAQLLAHLGAPEGTWRKVPTADL----PGLPDEVALGVTYAQIDAYLEGREVSDEAAARLERLFLNSRHKRALPVTPFDGWWQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72053 for 2140 contacts (-33.7/contact) +
2D Compatibility (PS) -29004 + (NN) -11614 + (LL) 680
1D Compatibility (HY) -22800 + (ID) 7850
Total energy: -142641.0 ( -66.65 by residue)
QMean score : 0.471
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