Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKLLFMGTPDFSATVLKGILADGKYDVLAVVTQPDRAVGRKKEIKMTPVKEVALENNIPVYQPEKLSGSPELEQLMTLGADGIVTAAFGQFLPTKLLE-SVGFAINVHASLLPKYRGGAPIHYAIINGEKEAGVTIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLLDTLPGYLSGDIKPIPQNEEEVSFSPNISPDEERIDWNKSSRDIFNHVRGMY-PWPVAHTLLEGNRFKLY--EVTMSEGKGSPGQVIAKTKNSLTVATGDGAIELKSVQPAGKPRMDIKDFLNGVGRNLEIGDKFGE |
1Z7E Chain:A ((2-280)) | --KTVVFAYHDMGCLGIEALLAAG-YEISAIFTHTD-----------GSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVA--PLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRLRRTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z7E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153062 for 2154 contacts (-71.1/contact) +
2D Compatibility (PS) -28864 + (NN) -10627 + (LL) 1380
1D Compatibility (HY) -19600 + (ID) 4500
Total energy: -215273.0 ( -99.94 by residue)
QMean score : 0.530
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