Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKYSIRGENIEVTEAIREYVETKLSKVEKYFNEAQELDTRVNLKVYREKTAK-VEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYREKIPASQVFTTEFEAEPDEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLYKREDGELGLIEAKGN
3TQM Chain:A ((7-91))
-------GQGVDISPALRELTEKKLHRIQPCRDEI----SNIHIIFHINKLKKIVDANVKLPGSTINAQAESDDMYKTVDLLMHKLETQLSKYKAK-----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40489 for 553 contacts (-73.2/contact) +
2D Compatibility (PS) -9259 + (NN) -2775 + (LL) 7872
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -51901.0 ( -93.85 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_3TQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQM-query.scw
PDB file :
Tito_Scwrl_3TQM.pdb
: