Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGIGIIIASHGKFAEGIHQSGSMIFGEQEKVQVVTFMPNEGPDDLYGHFNNAIAQFDADDEVLVLADLWSGSPFNQASRVMGENPERKMAIITGLNLPMLIQAYTERMMDANAGVEQVAANIIKESKEGIKALPEELNPVVEATPVAGVPADVPAEVKQSGSIPEGTVIGDGKLKINLARIDTRLLHGQVATAWTPASKANRIIVASDEVSKDELRKQLIKQAAPGGVKANVVPISKLIEVAKDPRFGNTRALILFETVQDALRAIEGGVEIPELNVGSMAHSTGKTMVNNVLSMDKDDVAAFEKLR-DLGVSFDVRKVPNDAKKNLFDLINKANVK |
3LFJ Chain:A ((-1-161)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------HM----WKIVFARIDDRLIHGQVMTRWMKGFPEASIVIIDDELAVDEFMKNIYTMAAPPGVKVKVFGVDAALKEWSQKTSVEEKVFLLFKNIDTCKRVMDGGLPITTLNIGGVAKTPQRKGISQSVSLSEDEVKTLLELKTKYNVDVYLQMIPDSEKIHLTTVVEKYFPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93839 for 1247 contacts (-75.3/contact) +
2D Compatibility (PS) -17292 + (NN) -4969 + (LL) 10052
1D Compatibility (HY) -15200 + (ID) 2300
Total energy: -123548.0 ( -99.08 by residue)
QMean score : 0.553
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