Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDLTKIDRDLEEAKKKVADLENEKRQAEENLQKQIGKLYVQIQLKKDKSQSYETILDDLKTELELIKQEEKARREEAKNRQLTSSDEH
2YY0 Chain:A ((61-85))
----EIELLRLELAEMKEKYEAIVEENKK--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4418 for 90 contacts (49.1/contact) +
2D Compatibility (PS) -2867 + (NN) -2769 + (LL) 5720
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 2252.0 ( 25.02 by residue)
QMean score : 0.769
(partial model without unconserved sides chains):
PDB file :
Tito_2YY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YY0-query.scw
PDB file :
Tito_Scwrl_2YY0.pdb
: