Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTELIDGKALSQKMQAELGRKVERLKEQ-HGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQH--INDKKIILAIDPKKDVDGFHPMNTGHLWSG--RPMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMN-RDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAALRSVSL |
1A4I Chain:A ((5-293)) | --EILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY-----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182505 for 2388 contacts (-76.4/contact) +
2D Compatibility (PS) -29898 + (NN) -10439 + (LL) 108
1D Compatibility (HY) -28400 + (ID) 6300
Total energy: -257434.0 ( -107.80 by residue)
QMean score : 0.586
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