Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVADYLAEGEKVQLIGFGNFEVRERAARKGRNPQTGAEIEIAASKVPAFKAGKALKDAVK
1RIY Chain:A ((2-90))
--NKKELIDRVAKKAGAKKKDVKLILDTILETITEALAKGEKIQIVGFGSFEVRK-------------------RKVPKFKPGKALKEKVK
General information:
TITO was launched using:
RESULT:
Template:
1RIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5556 for 377 contacts (-14.7/contact) +
2D Compatibility (PS) -7750 + (NN) -552 + (LL) 1660
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -20298.0 ( -53.84 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1RIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RIY-query.scw
PDB file :
Tito_Scwrl_1RIY.pdb
: