Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKRYDEEFKQSLVNLYQT-GKTQSELCKDYGVSTSTLAKWIKQYSQFKLEDNSVLTAKQIQELQKHNAQLEEENLILKKASAIFMQNLK
2JRT Chain:A ((29-79))
--DTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAAHGEKALKVTMIQKYRQLHHH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2JRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18537 for 299 contacts (-62.0/contact) +
2D Compatibility (PS) -5343 + (NN) -2508 + (LL) 2248
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -25790.0 ( -86.25 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_2JRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JRT-query.scw
PDB file :
Tito_Scwrl_2JRT.pdb
: