Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGLFDRLFGHKKKDKEPEIEASESVVLEDEDSVIDKEEGSNFSKESTLNRTSEVPVAEDDSFLELERDTALSESHQPVTSEIHPLESEDTDEIPVKEDDSFLELEDRAKTKVADTSEVENVVPDSTTLSDNVSAKSEASFSDKEQLSDSQASDQFSETPLQEEMSSGKTEVQTESEDTSAADAFLADYYAKRKAIEKEISSNSLSTDESEFSEAQEVLSQSQADTIKAESQEEKYNRSLKKTRTGFSARLNAFLSNFRRVDEEFFEELEEMLILSDVGVNVATQLTEDLRYEAKLENAKKSEDLKRVIVEKLVEIYEKDGIYNEAINFQ-EGLTVMLFVGVNGVGKTTSIGKLAHQYKSQGKKVMLVAADTFRAGAVAQLVEWGRRVDVPVVTGEEKADPASVVFDGMEKAVAQGVDVLLIDTAGRLQNKENLMAELEKIGRIIKRVVPDAPHETLLALDASTGQNALSQAKEFSKITPLTGLILTKIDGTAKGGVVLAIRQELDIPVKFIGFGEKIDDIGEFNSEDFMRGLLEGIL
1VMA Chain:A ((19-304))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKKGLQKTKETFFGRVVKLLKG-KKLDDETREELEELLIQADVGVETTEYILE--RLEEK--DGDALESLKEIILEILN--------FDTKLNVPPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTKLDGTAKGGITLAIARELGIPIKFIGVGEKAEDLRPFDPEAFVEVLLSE--


General information:
TITO was launched using:
RESULT:

Template: 1VMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -180066 for 2528 contacts (-71.2/contact) +
2D Compatibility (PS) -31504 + (NN) -18558 + (LL) 15068
1D Compatibility (HY) -26800 + (ID) 7300
Total energy: -249160.0 ( -98.56 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_1VMA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VMA-query.scw
PDB file : Tito_Scwrl_1VMA.pdb: