Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLAPVLTIAGTDPSGGAGIMADLKTFQARRTYGMAVVTSVVAQNT-CGVRGVQHIETAIIDQQLACVYDDIKPKAVKTGMLAERETISLVAS-YLKKYPQPYVLDPVMVATSGHRLIDSDAVEALKEDLLPLATIITPNLPEAEILVGYDLSDEVSIIKAGYDIQKQYSVRNVLIKGGHLDGLAKDY-LFLEKEGLITLSNQRINTIHTHGTGCTFAAVVAAELAKGQSILNAVSTAKSFITSAIETAPELGLGNGPVNHTSYQGD |
| 4C5N Chain:A ((3-264)) | ---LKKVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLETALS-IGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVM--------LNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126431 for 2285 contacts (-55.3/contact) +
2D Compatibility (PS) -27558 + (NN) -10851 + (LL) 784
1D Compatibility (HY) -14000 + (ID) 4850
Total energy: -182906.0 ( -80.05 by residue)
QMean score : 0.367
|
|
|