Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIFSAIDSKFWASIMENPWMILIHLMDIIIVAVLIYKFIKALAGTKIMSLIQGVILFIIIRFVSEWIGLTTITFLMNQIVTYGVIAGVVIFAPEIRTGLEKFGRTPQLFTQRSQLSSDEKLVDALVKAVAYMSPRKIGALIS-IERTQTLQEYIATGIPLDADISSELLINIFIPNTPLHDGAVIVKDK--KIATACSYLPLSESSSISKEFGTRHRAAIGLSENSDALTVIVSEETGGISVALKGEFLHDLSKDSFEAILRTQLIQNQEENSKLAWYNQLLRRK |
4YXM Chain:A ((57-159)) | ------------------------------------------------------------------------------------------------------------------------------------------GALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELSKMN-----GAIVLSEDITKIYYANVHL-VPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YXM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56461 for 715 contacts (-79.0/contact) +
2D Compatibility (PS) -10772 + (NN) -2803 + (LL) 13872
1D Compatibility (HY) -6400 + (ID) 1600
Total energy: -64164.0 ( -89.74 by residue)
QMean score : 0.428
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