Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRESIFEETAKGKVSRHVLLTILLALILLFTADFLT-YIIIELIISLDFW-KLEWDSDIVQLIILLATSISTVM-LF------MWVKFKEKRPISSLGLFKE-GALTELSRGWLVESVLFGACLILTI----ISGSGVIETVRFTADKLIWFLIFAVGWQVQSASVEILCRGWLLPVSATKYSKIVSVSISSIFFGLLHSANNHVSLISIFNLCLFGLFLSLYVILKGNIWGACGIHGAWNCVQGSVFGIEVSGEPMLSNSLVHVKTYGADWISG-GKFGVEG-SMI--TSIVLIVACYWLYQKSN-FPYD |
| 4RWR Chain:A ((55-323)) | ----VYREKQK-------------------KVESLPMEEYVTGVVASE--MNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYEGKPISASFFSTSNGRTENA-------ADYWGNDYPYLKSVDSPWDQASPKFTSEQIFTVADFQKRLGVKVLADGKVGDIKGRTEGK----RVKDVAFQGKTLTGRDVRDKLE-LRSSDFTWKQEGD------KIVVTTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDY- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187022 for 1915 contacts (-97.7/contact) +
2D Compatibility (PS) -25732 + (NN) 314 + (LL) 4568
1D Compatibility (HY) 8400 + (ID) 2150
Total energy: -201622.0 ( -105.29 by residue)
QMean score : 0.234
|
|
|