Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKTIQKELEGLDIRFDEPLKKYTYTKVGGPADYLAFPRNRLELSRIVKFANSQNIPWMVLGNASNIIVRDGGIRGFVIMFDKLSTVTV----NGYVIEAEAGANLIETTRIARYHSLTGFEFACGIPGSVGGAVFMNAGAYGGEIAHILLSAQ-VLTPQGELKTIEARNMQFGYRHSVI----QESGDIVISAKFALKPGDHLMITQEMDRL--------------TYLR--ELKQPLEYPSCGSVFKRP-----------------PGH---------FAGQLISEAHLKGQRIGGVEVSQKHAGFMVNIAEGSAQDYENLIEHVINTVESTSGVHLEPEVRIIGESLL
2MBR Chain:A ((3-330))-------------------LKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YRGTVII-NRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE


General information:
TITO was launched using:
RESULT:

Template: 2MBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158999 for 2293 contacts (-69.3/contact) +
2D Compatibility (PS) -29077 + (NN) -1193 + (LL) 1512
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -208607.0 ( -90.98 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_2MBR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MBR-query.scw
PDB file : Tito_Scwrl_2MBR.pdb: