Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKDKKIEIQISDAQVTVNGTKVDGYQLVIGKKIVGQIAELDSKFAVIKGEQVSGFYKNLDQAMGNIIEEYNLNR
1ICM Chain:A ((59-110))
----DVVFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAVREISGNELIQTYTYEGVEAKRIFKK
General information:
TITO was launched using:
RESULT:
Template:
1ICM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2796 for 252 contacts (11.1/contact) +
2D Compatibility (PS) -5708 + (NN) -27 + (LL) 308
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -5731.0 ( -22.74 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_1ICM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICM-query.scw
PDB file :
Tito_Scwrl_1ICM.pdb
: