Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDLSKALGLFPKHLSFDEEKPFIRLN----LSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETESQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
3WA1 Chain:A ((101-195)) | -------------------------------------------------------------------------IISRHYTGEERQKFEQVGSGDYITGEQFFQFY--TQNKTRVLSNCRALDSRTILLSTAKIFPIYPPASETQLTAFVNSSFYAAAIPQL-PQTSLLENIPEPTSLDDSGVLPKDAVRAVKGSALLPCIIVHDPNLNNSDKMKFNTYY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11672 for 406 contacts (-28.7/contact) +
2D Compatibility (PS) -8859 + (NN) 5075 + (LL) 4720
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -17886.0 ( -44.05 by residue)
QMean score : 0.167
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