Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNREEVQLLGFEIVAYAGDARSKLLEALRAAEAGDFSKADALVEEASGCIAEAHKSQTTMLAKEAAGEEIPYSVTMMHGQDHLMTTILLKDVMHHLIELYKRGIK
2LRK Chain:A ((2-100))
---EELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVEAQLHLMTSMLARELITELIELHEKLKA
General information:
TITO was launched using:
RESULT:
Template:
2LRK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20875 for 669 contacts (-31.2/contact) +
2D Compatibility (PS) -10964 + (NN) -8782 + (LL) 228
1D Compatibility (HY) -8400 + (ID) 1550
Total energy: -50343.0 ( -75.25 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2LRK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LRK-query.scw
PDB file :
Tito_Scwrl_2LRK.pdb
: