Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNKMKARFLIGLGGFAVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQYYTKEKLGENNHRIKPYMTDSAYSEEVAHQEESINQVYKDYLLDYRFEKAETFVNTETNEALAEVSYQVTYVSDASGNQQKSTQT-ETKTVKLAYSKLSNKLLV-----NQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN |
| 1N6M Chain:A ((279-348)) | ----------------------------------------------------------------------------------------------------------------------------------------EISVGSINLVDLAGSESPK---TETKNIKRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19935 for 289 contacts (69.0/contact) +
2D Compatibility (PS) -6621 + (NN) -4497 + (LL) 11580
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: 16597.0 ( 57.43 by residue)
QMean score : 0.130
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