Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKPIVRDTF-FLQQKSQMASRADVSLAKDLQDTLHANQNYCV-----------------GMAANMIGSLKRVIII-----NVGIT-NLVMFNPVLVAKS--DPY-ETEESCLSLVGCRSTQRYRH--ITISYRDINWKEQQIKLTDFPAQICQHELDHLEGILI
2AI9 Chain:A ((4-163))
-MKDIIRDGHPTLRQK---AAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMF
General information:
TITO was launched using:
RESULT:
Template:
2AI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66583 for 926 contacts (-71.9/contact) +
2D Compatibility (PS) -13325 + (NN) 4074 + (LL) 508
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -87026.0 ( -93.98 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_2AI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AI9-query.scw
PDB file :
Tito_Scwrl_2AI9.pdb
: