Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVIREQEFVNQYHYDARNLEWE--EENGTPKTNFEVTFQLANRDEAAKVT-------SIVAVLQFVIVRDEFVISGVISQMAHIQGRLINEPSEFSQDEVENLAAPLLEIVKRLTYEVTEIALDRPGVTLEFNS |
1SH2 Chain:A ((227-302)) | --IIFERHSRYRYHYDADYSRWDSTQQRAVLAAALEIMVKFSSEPHLAQVVAEDLLSPSVVDVGDFTISINEGLPSGVPCTSQWNSIAHWLLTLCALSEVTNLSPDIIQANSLFSFYGDDEIVSTDIKLDPEKLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2520 for 276 contacts (9.1/contact) +
2D Compatibility (PS) -6812 + (NN) 2546 + (LL) 312
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -6034.0 ( -21.86 by residue)
QMean score : 0.081
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