Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYLTAGESHGPSLTAIIEGIPAGLKLSAKDINEDLKRRQGGYGRGNRMKIETDQVIISSGVRHGKTLGSPITLTVTNKDHSKWLDIMSVEDIEERLKQKRRIKHPRPGHADLVGGIKYRFDDLRNALERSSARETTMRVAIGAIAKRILKE-IGIEIANHIVVFGGKEITVPDKLTVQQIKVLSSQSQVAIVNPSFEQEIKDYIDSVKKAGDTIGGVIETIVGGVPVGLGSYVHWDRKLDAKIAQAVVSINAFKGVEFGLGFKSGFLKGSQVMDSISWTKDQGYIRQSNNLGGFEGGMTNGEPIIVRGVMKPIPTLYKPLMSVDIDTHEPYRATVERSDPTALPAAGVVMEAVVATVLVTEVLEKFSSDNMYELKEAVKLYRNYVNHF |
4LJ2 Chain:A ((10-345)) | FRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRKEPDQVEIISGVFEGKTTGTPIGLLIRNTDQ-KSK------------------------------------RDYRGG-GRSSARETAMRVAAGAIAKKYLAEKFGVLIRGHVTQIGNE---VAEKLDWNEVPNNPFFCGDVDAVPRFEA----LVTSLREQGTSCGAKLEILAEKVPVGWGEPV-FDR-LDADIAHAMMSINAVKGVEIGDGFAVAGQFGHETRDELT---SHGFL--ANHAGGILGGISSGQTIRVAIALKPTASIT-----------------KGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADVVPPFAPIEP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130236 for 2280 contacts (-57.1/contact) +
2D Compatibility (PS) -31184 + (NN) -9388 + (LL) 4816
1D Compatibility (HY) -14400 + (ID) 6050
Total energy: -186442.0 ( -81.77 by residue)
QMean score : 0.439
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