Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKEDIKKQVRRAFDFRMAIRVYNNN-DIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVAWGAQYQLDTASHFVLLLAEKGAYYNADSMINSLVRRGLGDPAALESRIPLYKSFQENDMKIDSERSLWDWTAKQTYIALGNMMTAAAMIGVDSCPIEGFDYEKVNNILSKEGLIDDKKEAISCMVSFGYRLREPKHSRARKERQEVITWVE |
3GE6 Chain:A ((17-178)) | ----------------RRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSE---EGKATLAPLAKFNQVQVETSSAVIAVFGDMKAIDQLENIYDTAVEKGLMPQEVRDRQVPAIQGMYEN----VPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGMEKDRYVPVMLLSIGKAVDAGYPSVRLPINDIADWK------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71206 for 1090 contacts (-65.3/contact) +
2D Compatibility (PS) -17582 + (NN) -3121 + (LL) 2448
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -99361.0 ( -91.16 by residue)
QMean score : 0.524
|
|
|