Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYL-YNIRGSLAMANAGA----DTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
2QER Chain:A ((19-173)) | -----------------------------------------------------------------------------VRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIY---------GRYFDDEIYPELKYDRRGILSMAS--ASKKPNTNGSQFFITYSSL------------------------PQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57001 for 1160 contacts (-49.1/contact) +
2D Compatibility (PS) -15801 + (NN) -7473 + (LL) 7168
1D Compatibility (HY) -12800 + (ID) 3450
Total energy: -89357.0 ( -77.03 by residue)
QMean score : 0.570
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