Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYTFYEYPKCTTCRSAKKELTELGLTFEAIDIKSNPPKASLLKELLENSPYDLKKFFNTSGNSYRELGL-KDKFDDLTLDQALDLLASDGMLIKRPLLVKDNKILQIGYRTKYKDLNLV
1I9D Chain:A ((5-98))
--TIYHNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKNVEPYEQLGLAEDKFTD---DQLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLDILQD
General information:
TITO was launched using:
RESULT:
Template:
1I9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38874 for 616 contacts (-63.1/contact) +
2D Compatibility (PS) -10007 + (NN) -5879 + (LL) 704
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -63506.0 ( -103.09 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_1I9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I9D-query.scw
PDB file :
Tito_Scwrl_1I9D.pdb
: