Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVMDSLIIKQLIKSTFDIPLQVTYPNGNIETYNGNNPHVKLKLNKNFSVSELSKDPSIVLGEAVMDGDIEIDGSIQELILSAYRCGDSFLRNSKFSKLIPKQFHDKKHSKSDIQKHYDIGNDFYKLWLDDTMTYSCAYFKHENDSLEQAQLNKVHHILNKLNAQPGGKLLDIGCGWGTLIITAAKEYGLNATGITLSEEQASFITKRIKEEGLENKVTVLIKDYRDIHETYDYITSVGMFEHVGKENLSQYFQTISKRLNINGLALIH----------GITGQVGDNHGSGTNSWINKYIFPGGYIPRLTENLNHIASAGLQIADLEPLRRHYQKTLELWTKNFHNALPEVQKTHDKRFINMWDLYLQSCAASFESGNIDIFQYLLSKGVSKDTMPMTRDYMYSAN |
| 2FK8 Chain:A ((38-306)) | ----------------------------------------------------------------------------------------------------------------IQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSNKDKAIEVTSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPGAAA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118015 for 2039 contacts (-57.9/contact) +
2D Compatibility (PS) -27214 + (NN) -5307 + (LL) 6836
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -165150.0 ( -81.00 by residue)
QMean score : 0.578
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