Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDRY-ILAVESSCDETSVAIL-KNDKELLANIIASQVESHKRFGGVVPEVASRHHVEVVTTCFEDALQEAGIVASDLDAVAVTYGPGLVGALLVGMAAAKAFAWANKLPLIPVNHMAGHLMAAR---DVKELQYPLLALLVSGGHTELVYVSGPGDYKIVGETRDDAVGEAYDKVGRVMGLTYPA-GREIDQLAHKGQDTYHF-------PRAMIKEDHLEFSFSGLKSAFINLHHNAEQKGEALVLE------DLCASFQAAVLDILLAKTQKALLKYP-----VKTLVVAGGVAANQGLRERLATDISPDIDVVIPPLRLCGDNAGMIALAAAIEFEKENFASLKLNAKPSLAFEGL |
| 3WUH Chain:A ((7-355)) | --KGYKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLD--------KAHIHHQARIGPLTERALIESN-AREGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGRELGFKGTMIAREMEKFINQDINDQDFALKLEMP------RNMLSFSFSAFITA---LRTNLTKLGKT----PEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETEL---FNFYYPPMDLCSDNSIMIGWAGI-----EIWESLRLVSDLDICPIRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212032 for 2407 contacts (-88.1/contact) +
2D Compatibility (PS) -32414 + (NN) -19062 + (LL) 2560
1D Compatibility (HY) -22000 + (ID) 5450
Total energy: -288398.0 ( -119.82 by residue)
QMean score : 0.507
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