Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNKIAPSILAADYANFANELKRIEETTAEYVHIDIMDGQFVPNISFGADVVSSMRKHSK-LVFDCHLMVVDPERYIEDFAQAGADIMTIHVEATKHIHGALQ-------KIKEAGMKAGVVINPGTPVESLIPIL--DLVDQILIMTVNPGFGGQAFIPEMMSKVKTVAAWRKEYGHHYDIEVDGGIDNTTIKAAAEAGANVFVAGSYLFKASDLPAQVETLRVALDD
4NU7 Chain:A ((9-221))
-----ICPSVLASDLSSLASDAKRMVDAGCDWLHLDIMDGHFVPNISFGPGVVKALRGHLKSAFFDVHLMVSEPEKWIQPFADAGANSITFHWES---VGGDLQRAAELAKRIQARGIKAGLAIKPATKFEDLGEALAGDNFDMLLVMTVEPGFGGQKFMADMLQKVRTA----RSLFPKLNIQVDGGLDGETVKPAASAGANVIVAGTSMFKAENPAALMTFMRDVIAA
General information:
TITO was launched using:
RESULT:
Template:
4NU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179578 for 1711 contacts (-105.0/contact) +
2D Compatibility (PS) -22033 + (NN) -11786 + (LL) 920
1D Compatibility (HY) -21200 + (ID) 4950
Total energy: -238627.0 ( -139.47 by residue)
QMean score : 0.721
(partial model without unconserved sides chains):
PDB file :
Tito_4NU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NU7-query.scw
PDB file :
Tito_Scwrl_4NU7.pdb
: