Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIHDMIKTIEHFAETQADFPVYDILGEVHTYGQLKVDSDSLAAHIDSLGLVEKSPVLVFGGQEYEMLATFVALTKSGHAYIPVDQHSALDRIQAIMTVAQPSLIISIGEFPLEVDN----VPILDVSQVSAIFEEKTPYEVTHSVKGDDNYYIIFTSGTTGLPKGVQISHDNLLSFTNWMISDDEFSVPERPQMLAQPPYSFDLSVMYWAPTLAMGGTLFALPKTVVNDFKKLFATINELPVQVWTSTPSFADMALLSNDF--NSETLPQLTHFYFDGEELT----VKTAQKLRQRFPKARIVNAYGPTEATVALSAVAITD--EMLETCKRLPIGYT-KDDSPTYVIDEEGHKLPNGEQGEIIIAGPAVSKGYLNNPEKTAEAFFQFEGLPA---YHTGDLGSMTDEGLLLYGGRMDFQIKFNGYRIELEDVSQNLNKSQYVKSAVAVPRYNKDHKVQNLLAYIVLKEGVRDDFERDLDLTKAIKEDLKDIMMDYMMPSKFIYREDLPLTPNGKIDIKGLMSEVNK |
| 4D4G Chain:A ((57-514)) | -----------------------------TYEELNTKANQLAHYLRTLGVKSETLVGVCVDRSLEMVIGLLAILKAGGAYVPLDPTYPRERLTYMVQDAQISVLVTQTQWSNLISDYQGQVICLD-SQWAKI-ASYSQENLVNTVNPENLAYVIYTSGSTGKPKGVMIEHQSLVNFTKLAIAQYQITTSDRTLQFVS--ISFDVAAEEIYVTLCSGATLILRTEEMISSIPSFVQKSQDWQITVW-SLPT-AYWHLLVNELVKSKIALPDSLRLVIIGGERVQPELVRMWFKNVGNFPE--LINVYGPTEGTIAVSLCRLSQLTESQRNRTEIPIGKSLGENISVYVLDETLKTVPPETPGEIYIGGTALARGYLNRPELTAQKFIQDPFSPSERLYKTGDLGRYLADGNLEYLGRVDHQVKINGFRVELGEIETVLLQHHQVAQAVVIDR--------RLVAYLV-------PHSTEENLTVTLQQFLKNKLPSYMIPATFV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187574 for 3636 contacts (-51.6/contact) +
2D Compatibility (PS) -46288 + (NN) -15657 + (LL) 4924
1D Compatibility (HY) -34800 + (ID) 7100
Total energy: -286495.0 ( -78.79 by residue)
QMean score : 0.436
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