Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKVLTACGNGMGSSMVIKMKVENALRQLGVSNFESASCSVGEAKGLAANYDIVVASNHLIHELDGRT------KGHLVGLDNLMDDNEIKTKLQEIL
3NBM Chain:A ((6-87))
ELKVLVLCAGSGTSA-QLANAINEGANLTEVR-VIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKSPSKALQ
General information:
TITO was launched using:
RESULT:
Template:
3NBM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30614 for 513 contacts (-59.7/contact) +
2D Compatibility (PS) -8134 + (NN) -1489 + (LL) 128
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -44659.0 ( -87.05 by residue)
QMean score : 0.324
(partial model without unconserved sides chains):
PDB file :
Tito_3NBM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NBM-query.scw
PDB file :
Tito_Scwrl_3NBM.pdb
: