Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFQSKINYPKKSSIITQITLWYSSFIFILVIGVLIGSFFISKSIAENKSKKNLEAKAVQMSQALAKGHRYEAFEDGIFYSVYDQNGKVIYSGFPKGFKRDLDHQHKHKKKLSLFSMENRTFQYVDIPISGKNQWLRAIRTVDRLDKQLTELLFSLGIVLPLMLIIITVGGYLILKRTFRPIQEITETAQFITQNEDYTKRIITKNNENELTELAAVINTMLASIESSFVREKQFNNDVSHELRTPVTVILSESEYGKNYAENLSE-AKESFEVIHRQSLSMKKLVEQLLELTKAE-NPLSIQLEPLNFSIMMKQLVSDSSRLLDNT---PIHLDSQIEDDLWII-GQQTLLKRLFDNLFSNAIKFT--NNHISISLRQSDNQIVFSIKDNGLGISVDDQSKIWNRFYQVDSARTKDSQSGIGLGLSLVKQIATIHRAKIWVDSKPDNGSQFTLTFPKLKKD |
| 4Q20 Chain:A ((41-257)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RDFVGNVSYELRTPLTTIIGYSEL-LERAD--SERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDL---LLNAQERALKDAQLGGVTLAVECEEDVGLIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRD-------RGGPGLGLALVKALVELHGGWVALESEPGNGSTFTCHLPETQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81819 for 1555 contacts (-52.6/contact) +
2D Compatibility (PS) -22136 + (NN) -8377 + (LL) 19476
1D Compatibility (HY) -15200 + (ID) 2950
Total energy: -111006.0 ( -71.39 by residue)
QMean score : 0.420
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