Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIVVALGGNALGN-----SPEEQLRLVKHTAKSLVALIKKGHEIVVSHGNGPQVGAINLGMNFAAESGQGTNFPFPECGAMSQGYIGYHLQQSLLNELRQEGINKEVATIITQIEVDESDQAFSAPTKPIGTFYDKETSEKIAIEKGYTFVEDAGRGYRRVVASPEPKKIIEINSIKTLIENDTLVIAGGGGGIPVINKGG--YEGIAAVIDKDKSSALLAGELAADQLIILTAVDYVYTQFGKENQKALTEVNENQMIDYVNQGEFAKGSMLPKVIACMSFLDHNPKGTALITSLNGLEDALDGKLGTRITK |
2E9Y Chain:A ((8-311)) | ----VIALGGNAIAGPGMDVSVESQTAAVKRASSIIADVLADGWRSVITHGNGPQVG--YLSEAFEALPPERPRQPLYIATAMTQAWIGLLLKHSLEEELRRRGLNVLVPVVISRVLVDVSDPSFNNPSKPVGPIYGREEAEELSRRYGWVFKRDPRGGFRRVVPSPRPVSIVDRDLIAEASAESPAVVALGGGGVPVVERPGGVLEPVEAVVDKDLASSLLATQLNADLLVILTDVPGVAVNYGREGERWLRRAAASELKKYLREGHFPPGSMGPKVEAAISFVERTGK-PAVIGSLEEARQVLSLQAGTVVML |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148630 for 2512 contacts (-59.2/contact) +
2D Compatibility (PS) -32462 + (NN) -13367 + (LL) 796
1D Compatibility (HY) -20000 + (ID) 5850
Total energy: -219513.0 ( -87.39 by residue)
QMean score : 0.561
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