Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIITVGKLKEKYLKEGVAEYQKRLNRFSKIETIELADEKTPDKASISENQRILD-IEGERILSKIGERDYVIGLAIEGKQLPSESFSHLIDQKMISGYSTITFVIGGSLGLSQ--KVKKRADYLMSFGLLTLPHQLMKLVLMEQIYRAFMIRQGTPYHK
4KUH Chain:A ((27-149))
-----VIVRDIKEEFVDRGIATITKSLSKLVAKEKITEADK-----------EEILSRISGTTDMKLAADCDLVVEAAIENMKIKKEIFAEL---DGICKPETILASNTSSLSITEVASATKRADKVIGMHFFN-PAPVMKLVEVIRGAATSQETFDAVKEM
General information:
TITO was launched using:
RESULT:
Template:
4KUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30573 for 745 contacts (-41.0/contact) +
2D Compatibility (PS) -12821 + (NN) -556 + (LL) 1420
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -53180.0 ( -71.38 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_4KUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KUH-query.scw
PDB file :
Tito_Scwrl_4KUH.pdb
: