Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHA--------GISRGL----------EELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQ-TYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK |
| 3QKU Chain:A ((1-318)) | MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILV-GLYWPLRIKDIKK-----DEFTKVGAR------DTYIDLIFEKDGTKYRIT---RRFLKGYSS----------------GEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILE--SDEAREKVVREVLNLDKFETAYKKLSELKKTINNRIKEYGGSGGIKDLEKAKDFTEELIEKVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSLYLA---GEISLLILDEPTPYLDEERRRKLITIME----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15254 for 2140 contacts (-7.1/contact) +
2D Compatibility (PS) -31640 + (NN) -9378 + (LL) 6056
1D Compatibility (HY) -18000 + (ID) 3600
Total energy: -71816.0 ( -33.56 by residue)
QMean score : 0.334
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