Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPKSIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS
1M93 Chain:A ((13-27))
-------------------------------------------------------GENVFISPPSISSVL-----------
General information:
TITO was launched using:
RESULT:
Template:
1M93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1619 for 40 contacts (40.5/contact) +
2D Compatibility (PS) -1410 + (NN) 1144 + (LL) 4928
1D Compatibility (HY) -800 + (ID) 250
Total energy: 5231.0 ( 130.78 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_1M93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M93-query.scw
PDB file :
Tito_Scwrl_1M93.pdb
: