Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIGVLGLQGAVREHIH---AIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLI--DTYQFMEPLREFA-AQGKPMFGTCAGLIILAKEIAG-------SDNPHLGLLNVVVERNSFGRQVDSFEADLTI----KGLDEPFTGVFIRAPHILEA-GENVEVLSEHNGR------IVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV
2ABW Chain:A ((4-217))
-ITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNF----NDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSDEVKVLATFSHESYGPNIIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVKNYK-----
General information:
TITO was launched using:
RESULT:
Template:
2ABW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157680 for 1527 contacts (-103.3/contact) +
2D Compatibility (PS) -19411 + (NN) 357 + (LL) 1084
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -197150.0 ( -129.11 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2ABW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ABW-query.scw
PDB file :
Tito_Scwrl_2ABW.pdb
: