Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSAEVLYELKVAEAKYFFYLREAKQRNLKISRWK
2DE0 Chain:X ((108-143))
--------------------------------------LGKDHEILRRRIENGAKELWFFLQSELKKLK-----
General information:
TITO was launched using:
RESULT:
Template:
2DE0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1890 for 122 contacts (15.5/contact) +
2D Compatibility (PS) -3504 + (NN) -4098 + (LL) 3972
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -3690.0 ( -30.25 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_2DE0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DE0-query.scw
PDB file :
Tito_Scwrl_2DE0.pdb
: