Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEPIFIIGIILGLVILLFLSGSAAKPLKWIGITAVKFVAGALLLVCVNMFGGSLGIHVPINLVTTAISGILGIPGIAALVVIKQFII
1Q90 Chain:G ((1-30))
MVEPLLCGIVLGLVPVTIAGLFVTAYLQYL---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7591 for 114 contacts (-66.6/contact) +
2D Compatibility (PS) -3112 + (NN) -1559 + (LL) 4908
1D Compatibility (HY) -4000 + (ID) 400
Total energy: -11754.0 ( -103.11 by residue)
QMean score : 0.211
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: