Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE
4EE1 Chain:A ((151-208))
-KLDEIVLLEGFMDVIKSDTAGLKNVVATMGTQLSDEHITFIR--KLTSNITLMFDGDFAG-----------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10634 for 309 contacts (-34.4/contact) +
2D Compatibility (PS) -6782 + (NN) -6706 + (LL) 9268
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -18954.0 ( -61.34 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_4EE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EE1-query.scw
PDB file :
Tito_Scwrl_4EE1.pdb
: