Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKDIATPIRTKEILKKYGFSFKKSLGQNFLIDTNILNRIVDHAEVTEKTGVIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYENVTVIHQDVLKADVKSVIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKGIVVMLQKEVAERMAADPSSKEYGSLSIAVQFYTEAKTVMIVPKTVFVPQPNVDSAVIRLILRDGPAVDVENESFFFQLIKASFAQRRKTLLNNLVNNLPEGKAQKSTIEQVLEE---TNIDGKR----RGESLSIEEFAALSNGLYKALF
3FYD Chain:A ((1-260))---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKL--------DFNKVVANLPYQISSPITFKLIKRGFDL--AVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGK-YHIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEMKKILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFYRFL-


General information:
TITO was launched using:
RESULT:

Template: 3FYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -186261 for 2021 contacts (-92.2/contact) +
2D Compatibility (PS) -27161 + (NN) -7774 + (LL) 2600
1D Compatibility (HY) -20800 + (ID) 5050
Total energy: -244446.0 ( -120.95 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_3FYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FYD-query.scw
PDB file : Tito_Scwrl_3FYD.pdb: